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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UCEC rs58172415 chr1:213019300 C/T 7.2E-8 122 14.67 10.97 2.38 KM Plot
UCEC rs58346707 chr1:213074202 AT/A 1.13E-7 124 14.65 12.17 2.38 KM Plot
UCEC rs59918853 chr15:33755106 G/A 0.000108 123 13.2 14.1 12.57 KM Plot
UCEC rs59953347 chr2:48826604 C/A 2.4E-6 121 14.67 14.1 6.33 KM Plot
UCEC rs6008545 chr22:46686375 C/T 0.000189 121 14.65 13.07 10.33 KM Plot
UCEC rs6050765 chr20:25638580 C/T 1.29E-5 123 13.7 17.1 6.65 KM Plot
UCEC rs6050775 chr20:25644956 A/C 1.29E-5 124 13.7 16.98 6.65 KM Plot
UCEC rs6050789 chr20:25669004 G/A 9.97E-6 125 13.7 17.1 6.65 KM Plot
UCEC rs60860756 chr15:33755322 A/G 0.000108 123 13.2 14.1 12.57 KM Plot
UCEC rs60963943 chr20:25641440 G/C 1.29E-5 124 13.7 16.98 6.65 KM Plot
UCEC rs61847076 chr10:51591402 C/G 0 121 14.03 11.47 1.67 KM Plot
UCEC rs61847077 chr10:51591433 C/T 0 124 14.1 11.47 1.67 KM Plot
UCEC rs62011975 chr15:82451554 C/T 2.82E-7 124 14.88 13.07 8.1 KM Plot
UCEC rs62012003 chr15:82475577 T/A 2.26E-7 124 14.87 13.07 11.37 KM Plot
UCEC rs62012004 chr15:82476265 C/T 2.82E-7 124 14.88 11.53 11.37 KM Plot